Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | D7004_09215 | Not Available | Negative | 2203098 - 2204345 | 46528.1 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | D7004_09220 | Not Available | Negative | 2204345 - 2205802 | 53558.2 |
| pasta domain-containing protein | D7004_09225 | Not Available | Negative | 2206073 - 2208172 | 77128.4 |
| hypothetical protein | D7004_09230 | Not Available | Negative | 2208162 - 2208578 | 15919.4 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | D7004_09235 | Not Available | Negative | 2208575 - 2209480 | 33810.6 |
| division/cell wall cluster transcriptional repressor mraz | D7004_09240 | Not Available | Negative | 2209470 - 2209937 | 17222.6 |
| cupin domain-containing protein | D7004_09245 | Not Available | Positive | 2210413 - 2210991 | 21455.5 |
| hypothetical protein | D7004_09250 | Not Available | Positive | 2211061 - 2211453 | 14275.6 |
| phosphoglycerate kinase | D7004_09255 | Not Available | Negative | 2211537 - 2212730 | 42896.5 |
| gnat family n-acetyltransferase | D7004_09260 | Not Available | Negative | 2212737 - 2213174 | 16689.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

