Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin acylase family protein | D7004_09110 | Not Available | Positive | 2175659 - 2178088 | 92012.8 |
| hypothetical protein | D7004_09115 | Not Available | Positive | 2178094 - 2178453 | 13277.1 |
| acyl transferase | D7004_09120 | Not Available | Positive | 2178458 - 2179456 | 37701.1 |
| res domain-containing protein | D7004_09125 | Not Available | Negative | 2179459 - 2179911 | 17099.9 |
| duf2384 domain-containing protein | D7004_09130 | Not Available | Negative | 2179911 - 2180390 | 17812.8 |
| tyrosine--trna ligase | D7004_09135 | Not Available | Negative | 2180451 - 2181737 | 47821.3 |
| duf479 domain-containing protein | D7004_09140 | Not Available | Positive | 2181891 - 2182565 | 26243.8 |
| nad-dependent dna ligase liga | D7004_09145 | Not Available | Positive | 2182625 - 2184643 | 76106.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | D7004_09150 | Not Available | Positive | 2184723 - 2185610 | 31854.3 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_09155 | Not Available | Negative | 2185679 - 2187346 | 61896.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

