Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit beta | D7004_08645 | Not Available | Negative | 2076759 - 2079158 | 88144.6 |
| hypothetical protein | D7004_08650 | Not Available | Negative | 2079743 - 2079937 | 6815.95 |
| hypothetical protein | D7004_08655 | Not Available | Negative | 2079940 - 2080125 | 6256.37 |
| diacylglyceryl transferase | D7004_08665 | Not Available | Negative | 2081513 - 2082286 | 29668.2 |
| endonuclease/exonuclease/phosphatase family protein | D7004_08670 | Not Available | Negative | 2082291 - 2083130 | 31726.7 |
| dna repair protein radc | D7004_08675 | Not Available | Negative | 2083205 - 2083903 | 26051.5 |
| 30s ribosomal protein s20 | D7004_08680 | Not Available | Negative | 2083970 - 2084224 | 9618.93 |
| phosphoribosylglycinamide formyltransferase | D7004_08685 | Not Available | Positive | 2084464 - 2085042 | 21956.4 |
| hypothetical protein | D7004_08690 | Not Available | Negative | 2085282 - 2086712 | 54990.6 |
| hypothetical protein | D7004_08695 | Not Available | Negative | 2087300 - 2087752 | 16834.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

