Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 2053577 - 2053649 | Not Available |
| ribosome-associated translation inhibitor raia | D7004_08550 | Not Available | Negative | 2053880 - 2054227 | 13148.8 |
| integrase | D7004_08555 | Not Available | Negative | 2054242 - 2055126 | 33631.1 |
| 30s ribosomal protein s21 | D7004_08560 | Not Available | Negative | 2055267 - 2055461 | 7552.33 |
| ragb/susd family nutrient uptake outer membrane protein | D7004_08565 | Not Available | Negative | 2055647 - 2057095 | 52297.9 |
| susc/raga family tonb-linked outer membrane protein | D7004_08570 | Not Available | Negative | 2057106 - 2060261 | 113601.0 |
| hypothetical protein | D7004_08575 | Not Available | Positive | 2060852 - 2061238 | 14622.8 |
| acyl-coa dehydrogenase | D7004_08580 | Not Available | Negative | 2061414 - 2062568 | 41745.0 |
| helix-hairpin-helix domain-containing protein | D7004_08585 | Not Available | Negative | 2062817 - 2063719 | 34748.0 |
| lysophospholipid acyltransferase family protein | D7004_08590 | Not Available | Positive | 2063813 - 2065564 | 66657.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

