Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | D7004_08395 | Not Available | Negative | 2024399 - 2024737 | 12797.6 |
| dna topoisomerase (atp-hydrolyzing) subunit b | D7004_08400 | Not Available | Negative | 2024873 - 2026831 | 72190.9 |
| omph family outer membrane protein | D7004_08405 | Not Available | Positive | 2027361 - 2027957 | 22110.9 |
| nucleoside deaminase | D7004_08410 | Not Available | Positive | 2028026 - 2028508 | 18173.8 |
| ecsc family protein | D7004_08415 | Not Available | Positive | 2028564 - 2029337 | 29635.4 |
| rna-binding s4 domain-containing protein | D7004_08420 | Not Available | Negative | 2029366 - 2029770 | 15220.2 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | D7004_08425 | Not Available | Positive | 2029946 - 2030764 | 29652.2 |
| glycosyltransferase family 1 protein | D7004_08430 | Not Available | Positive | 2030780 - 2031985 | 45601.3 |
| duf4136 domain-containing protein | D7004_08435 | Not Available | Negative | 2031997 - 2032557 | 20782.0 |
| threonylcarbamoyl-amp synthase | D7004_08440 | Not Available | Positive | 2032752 - 2033318 | 21030.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

