Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylpyruvate dioxygenase | D7004_08245 | Not Available | Negative | 1993342 - 1994472 | 42677.4 |
| homogentisate 1,2-dioxygenase | D7004_08250 | Not Available | Negative | 1994703 - 1995869 | 44822.2 |
| fumarylacetoacetate hydrolase family protein | D7004_08255 | Not Available | Positive | 1996250 - 1997248 | 36984.2 |
| flavin reductase family protein | D7004_08260 | Not Available | Positive | 1997248 - 1998135 | 32609.5 |
| hypothetical protein | D7004_08265 | Not Available | Positive | 1998157 - 1998759 | 23236.7 |
| nlpc/p60 family protein | D7004_08270 | Not Available | Negative | 1998762 - 1999310 | 19889.1 |
| hypothetical protein | D7004_08275 | Not Available | Negative | 1999433 - 1999807 | 13962.4 |
| sdr family oxidoreductase | D7004_08280 | Not Available | Negative | 1999883 - 2000584 | 25115.5 |
| type ii toxin-antitoxin system vapc family toxin | D7004_08285 | Not Available | Negative | 2000622 - 2000984 | 13243.3 |
| aromatic amino acid hydroxylase | D7004_08290 | Not Available | Negative | 2001172 - 2002950 | 66858.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

