Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glu/leu/phe/val dehydrogenase | D7004_08045 | Not Available | Negative | 1952116 - 1953537 | 51773.1 |
| ccmd family protein | D7004_08050 | Not Available | Negative | 1953671 - 1953889 | 8204.47 |
| abc transporter permease | D7004_08055 | Not Available | Negative | 1953985 - 1954653 | 25430.5 |
| abc transporter permease | D7004_08060 | Not Available | Negative | 1955139 - 1955804 | 24675.0 |
| methylated-dna--[protein]-cysteine s-methyltransferase | D7004_08065 | Not Available | Positive | 1956548 - 1957027 | 17836.3 |
| hypothetical protein | D7004_08070 | Not Available | Positive | 1957029 - 1957427 | 14972.6 |
| s-adenosylmethionine decarboxylase | D7004_08075 | Not Available | Positive | 1957494 - 1957847 | 13359.7 |
| duf4178 domain-containing protein | D7004_08080 | Not Available | Positive | 1957847 - 1959154 | 50104.4 |
| duf350 domain-containing protein | D7004_08085 | Not Available | Positive | 1959337 - 1959561 | 8308.63 |
| polyamine aminopropyltransferase | D7004_08090 | Not Available | Positive | 1959563 - 1961074 | 56612.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

