Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1579 domain-containing protein | D7004_00745 | Not Available | Negative | 169548 - 170048 | 18538.8 |
| 3'-5' exonuclease | D7004_00750 | Not Available | Positive | 170129 - 170842 | 27494.4 |
| abc transporter atp-binding protein | D7004_00755 | Not Available | Positive | 170842 - 172545 | 63937.7 |
| ribonuclease r | D7004_00760 | Not Available | Positive | 172707 - 174836 | 80615.3 |
| carboxypeptidase-like regulatory domain-containing protein | D7004_00765 | Not Available | Positive | 174837 - 176036 | 45305.1 |
| polyprenyl synthetase family protein | D7004_00770 | Not Available | Positive | 176045 - 177019 | 36360.1 |
| 50s ribosomal protein l27 | D7004_00775 | Not Available | Negative | 177197 - 177610 | 14597.7 |
| 50s ribosomal protein l21 | D7004_00780 | Not Available | Negative | 177662 - 177973 | 11371.9 |
| hypothetical protein | D7004_00785 | Not Available | Negative | 178115 - 178615 | 19305.5 |
| dicarboxylate/amino acid:cation symporter | D7004_00790 | Not Available | Negative | 178787 - 180163 | 49898.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

