Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D7004_07845 | Not Available | Negative | 1905530 - 1907569 | 75714.1 |
| hypothetical protein | D7004_07850 | Not Available | Negative | 1907830 - 1908234 | 14879.0 |
| l,d-transpeptidase | D7004_07855 | Not Available | Negative | 1908253 - 1909815 | 60127.2 |
| atp phosphoribosyltransferase | D7004_07860 | Not Available | Positive | 1910087 - 1910938 | 30801.4 |
| histidinol dehydrogenase | D7004_07865 | Not Available | Positive | 1910998 - 1912293 | 46514.9 |
| histidinol-phosphate transaminase | D7004_07870 | Not Available | Positive | 1912354 - 1913394 | 38896.6 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | D7004_07875 | Not Available | Positive | 1913399 - 1914532 | 42525.8 |
| imidazole glycerol phosphate synthase subunit hish | D7004_07880 | Not Available | Positive | 1914610 - 1915200 | 21581.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | D7004_07885 | Not Available | Positive | 1915258 - 1916007 | 28010.0 |
| imidazole glycerol phosphate synthase subunit hisf | D7004_07890 | Not Available | Positive | 1916170 - 1916925 | 27302.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

