Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D7004_07740 | Not Available | Negative | 1886357 - 1886689 | 13188.1 |
| cpbp family intramembrane metalloprotease | D7004_07745 | Not Available | Negative | 1887183 - 1887611 | 16584.4 |
| nucleotidyl transferase abieii/abigii toxin family protein | D7004_07750 | Not Available | Negative | 1887651 - 1888505 | 33408.1 |
| hypothetical protein | D7004_07755 | Not Available | Negative | 1888502 - 1889140 | 24496.2 |
| hypothetical protein | D7004_07760 | Not Available | Positive | 1889664 - 1889867 | 7616.21 |
| Trna-leu | Not Available | Not Available | Positive | 1891372 - 1891451 | Not Available |
| sensor histidine kinase | D7004_07775 | Not Available | Negative | 1891565 - 1892917 | 50703.7 |
| duf3817 domain-containing protein | D7004_07780 | Not Available | Negative | 1893211 - 1893501 | 11123.2 |
| fe-s protein assembly co-chaperone hscb | D7004_07785 | Not Available | Negative | 1893741 - 1894280 | 21066.9 |
| rip metalloprotease rsep | D7004_07790 | Not Available | Negative | 1894355 - 1895671 | 48007.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

