Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| four helix bundle protein | D7004_07235 | Not Available | Negative | 1778171 - 1778542 | 14561.5 |
| thymidylate synthase | D7004_07240 | Not Available | Negative | 1778635 - 1779456 | 31004.1 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | D7004_07245 | Not Available | Positive | 1779654 - 1780457 | 29715.7 |
| osmc family peroxiredoxin | D7004_07250 | Not Available | Positive | 1780537 - 1780956 | 15337.7 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D7004_07255 | Not Available | Positive | 1781027 - 1782196 | 42982.3 |
| pirin family protein | D7004_07260 | Not Available | Positive | 1782586 - 1783308 | 26696.4 |
| hypothetical protein | D7004_07265 | Not Available | Positive | 1783373 - 1783669 | 10703.1 |
| gxxexxy protein | D7004_07270 | Not Available | Negative | 1783840 - 1784232 | 14954.2 |
| duf1049 domain-containing protein | D7004_07275 | Not Available | Negative | 1784387 - 1784665 | 10211.6 |
| hypothetical protein | D7004_07280 | Not Available | Negative | 1784669 - 1787473 | 107636.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

