Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | D7004_07185 | Not Available | Negative | 1763960 - 1765507 | 56800.6 |
| acetyl-coa carboxylase carboxyltransferase subunit beta | D7004_07190 | Not Available | Negative | 1766571 - 1767416 | 31257.1 |
| class ii fructose-bisphosphate aldolase | D7004_07195 | Not Available | Positive | 1767842 - 1768921 | 39788.2 |
| low affinity iron permease family protein | D7004_07200 | Not Available | Positive | 1769064 - 1769546 | 17987.8 |
| gnat family n-acetyltransferase | D7004_07205 | Not Available | Positive | 1769546 - 1769968 | 15969.9 |
| alpha/beta hydrolase | D7004_07210 | Not Available | Negative | 1770003 - 1770953 | 34978.4 |
| hydroxymethylglutaryl-coa lyase | D7004_07215 | Not Available | Negative | 1771143 - 1772009 | 31603.9 |
| nad(p)/fad-dependent oxidoreductase | D7004_07220 | Not Available | Negative | 1772226 - 1773542 | 48805.5 |
| protein translocase subunit secdf | D7004_07225 | Not Available | Negative | 1773955 - 1776945 | 108065.0 |
| dihydrofolate reductase | D7004_07230 | Not Available | Negative | 1777578 - 1778081 | 19037.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

