Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D7004_07085 | Not Available | Negative | 1744431 - 1746221 | 68021.9 |
| glu/leu/phe/val dehydrogenase | D7004_07090 | Not Available | Positive | 1746330 - 1747418 | 39233.4 |
| transcription antitermination factor nusb | D7004_07095 | Not Available | Positive | 1747464 - 1748414 | 36971.9 |
| duf1573 domain-containing protein | D7004_07100 | Not Available | Positive | 1748416 - 1748871 | 16283.6 |
| preprotein translocase subunit yajc | D7004_07105 | Not Available | Positive | 1748953 - 1749270 | 11091.0 |
| ybbr-like domain-containing protein | D7004_07110 | Not Available | Positive | 1749483 - 1750340 | 33018.9 |
| dephospho-coa kinase | D7004_07115 | Not Available | Positive | 1750340 - 1750945 | 22574.2 |
| exonuclease | D7004_07120 | Not Available | Positive | 1751612 - 1752568 | 36212.5 |
| uma2 family endonuclease | D7004_07125 | Not Available | Negative | 1752786 - 1753388 | 23226.5 |
| zinc/iron permease | D7004_07130 | Not Available | Negative | 1753458 - 1754180 | 26235.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

