Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 1702789 - 1702862 | Not Available |
| rna methyltransferase | D7004_06930 | Not Available | Negative | 1702932 - 1703678 | 27494.3 |
| hypothetical protein | D7004_06935 | Not Available | Positive | 1703669 - 1706074 | 91718.1 |
| hypothetical protein | D7004_06940 | Not Available | Negative | 1706083 - 1706613 | 19784.5 |
| patatin | D7004_06945 | Not Available | Negative | 1706610 - 1708901 | 86912.4 |
| tryptophan-rich sensory protein | D7004_06950 | Not Available | Negative | 1708957 - 1709430 | 18222.1 |
| hypothetical protein | D7004_06960 | Not Available | Positive | 1711062 - 1711520 | 17621.6 |
| hypothetical protein | D7004_06965 | Not Available | Positive | 1711584 - 1712030 | 16600.9 |
| alpha-glucan family phosphorylase | D7004_06970 | Not Available | Positive | 1712208 - 1713860 | 62587.9 |
| carbohydrate kinase | D7004_06975 | Not Available | Positive | 1714566 - 1716053 | 54528.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

