Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D7004_06875 | Not Available | Negative | 1692468 - 1692800 | 12652.4 |
| alpha-amylase | D7004_06880 | Not Available | Positive | 1692856 - 1694349 | 57226.5 |
| duf5103 domain-containing protein | D7004_06885 | Not Available | Negative | 1694458 - 1695735 | 49572.1 |
| abc transporter atp-binding protein | D7004_06890 | Not Available | Negative | 1696143 - 1698050 | 71906.8 |
| gdp-mannose pyrophosphatase nudk | D7004_06895 | Not Available | Positive | 1698354 - 1698941 | 22263.6 |
| rrf2 family transcriptional regulator | D7004_06900 | Not Available | Positive | 1699394 - 1699804 | 14894.9 |
| nad-dependent epimerase/dehydratase family protein | D7004_06905 | Not Available | Positive | 1699879 - 1700529 | 23449.8 |
| quinone-dependent dihydroorotate dehydrogenase | D7004_06910 | Not Available | Positive | 1700775 - 1701806 | 38257.4 |
| dna alkylation repair protein | D7004_06915 | Not Available | Negative | 1701816 - 1702481 | 25328.6 |
| spore protein | D7004_06920 | Not Available | Negative | 1702584 - 1702754 | 6310.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

