Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphate pyrophosphohydrolase | D7004_06770 | Not Available | Negative | 1666387 - 1667193 | 30859.5 |
| hypothetical protein | D7004_06775 | Not Available | Negative | 1667204 - 1667653 | 17105.7 |
| ai-2e family transporter | D7004_06780 | Not Available | Negative | 1667855 - 1668967 | 41541.9 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | D7004_06785 | Not Available | Negative | 1669259 - 1669921 | 24578.2 |
| hypothetical protein | D7004_06790 | Not Available | Positive | 1670116 - 1670454 | 12970.8 |
| atpase | D7004_06795 | Not Available | Positive | 1670589 - 1671050 | 17921.4 |
| duf2625 domain-containing protein | D7004_06800 | Not Available | Negative | 1671095 - 1671871 | 29371.3 |
| m13 family peptidase | D7004_06805 | Not Available | Negative | 1672357 - 1674393 | 75847.4 |
| cadmium-translocating p-type atpase | D7004_06810 | Not Available | Positive | 1675097 - 1676911 | 65688.1 |
| valine--trna ligase | D7004_06820 | Not Available | Positive | 1678148 - 1680868 | 104213.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

