Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-amino-4-deoxychorismate lyase | D7004_06720 | Not Available | Positive | 1657304 - 1658149 | 31986.7 |
| methionyl-trna formyltransferase | D7004_06725 | Not Available | Negative | 1658239 - 1659147 | 33195.3 |
| dna topoisomerase ib | D7004_06730 | Not Available | Positive | 1659236 - 1660279 | 39727.0 |
| hypothetical protein | D7004_06735 | Not Available | Negative | 1660338 - 1660544 | 7664.84 |
| duf1343 domain-containing protein | D7004_06740 | Not Available | Negative | 1660632 - 1661903 | 47161.3 |
| abc transporter permease | D7004_06745 | Not Available | Positive | 1662059 - 1663279 | 45900.0 |
| hypothetical protein | D7004_06750 | Not Available | Negative | 1663283 - 1663675 | 14443.7 |
| trna pseudouridine synthase a | D7004_06755 | Not Available | Negative | 1663743 - 1664543 | 31031.5 |
| hypothetical protein | D7004_06760 | Not Available | Positive | 1665533 - 1665913 | 14604.2 |
| hypothetical protein | D7004_06765 | Not Available | Negative | 1665976 - 1666383 | 15062.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

