Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | D7004_06670 | Not Available | Negative | 1646796 - 1649003 | 83916.5 |
| duf4294 domain-containing protein | D7004_06675 | Not Available | Positive | 1649113 - 1649727 | 23518.6 |
| glutathione peroxidase | D7004_06680 | Not Available | Positive | 1649737 - 1650252 | 19874.1 |
| bacillithiol biosynthesis deacetylase bshb1 | D7004_06685 | Not Available | Positive | 1650257 - 1650973 | 26913.1 |
| acyl-coa dehydrogenase | D7004_06690 | Not Available | Positive | 1651382 - 1652743 | 50387.2 |
| hypothetical protein | D7004_06695 | Not Available | Positive | 1652792 - 1653016 | 8381.9 |
| hypothetical protein | D7004_06700 | Not Available | Negative | 1653009 - 1653413 | 15462.7 |
| l-lysine 6-transaminase | D7004_06705 | Not Available | Negative | 1653416 - 1654747 | 50295.2 |
| pyridoxal-phosphate dependent enzyme | D7004_06710 | Not Available | Negative | 1654951 - 1655820 | 32347.4 |
| rlua family pseudouridine synthase | D7004_06715 | Not Available | Positive | 1656272 - 1657300 | 39248.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

