Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | D7004_06570 | Not Available | Positive | 1624951 - 1625676 | 27973.6 |
| 30s ribosomal protein s1 | D7004_06575 | Not Available | Negative | 1625739 - 1627673 | 71480.0 |
| sh3 domain-containing protein | D7004_06580 | Not Available | Negative | 1628059 - 1628778 | 26869.0 |
| tpm domain-containing protein | D7004_06585 | Not Available | Negative | 1628916 - 1630418 | 56306.2 |
| duf1080 domain-containing protein | D7004_06590 | Not Available | Negative | 1630478 - 1631311 | 31161.4 |
| (d)cmp kinase | D7004_06595 | Not Available | Negative | 1631366 - 1632046 | 25580.6 |
| hypothetical protein | D7004_06600 | Not Available | Negative | 1632108 - 1632767 | 25739.8 |
| aminoacyl-trna hydrolase | D7004_06605 | Not Available | Positive | 1633041 - 1633451 | 15630.2 |
| lipid a deacylase lpxr family protein | D7004_06610 | Not Available | Negative | 1633448 - 1634395 | 35358.6 |
| endopeptidase la | D7004_06615 | Not Available | Negative | 1634488 - 1636959 | 92391.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

