Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1501 domain-containing protein | D7004_00595 | Not Available | Negative | 133417 - 134616 | 44950.3 |
| duf1800 domain-containing protein | D7004_00600 | Not Available | Negative | 134691 - 136139 | 55133.0 |
| leucyl/phenylalanyl-trna--protein transferase | D7004_00605 | Not Available | Positive | 136207 - 136845 | 23462.2 |
| duf1080 domain-containing protein | D7004_00610 | Not Available | Negative | 136909 - 137691 | 28830.2 |
| duf2892 domain-containing protein | D7004_00615 | Not Available | Negative | 137755 - 138072 | 11577.7 |
| dead/deah box helicase | D7004_00620 | Not Available | Negative | 138559 - 141450 | 111689.0 |
| efflux transporter outer membrane subunit | D7004_00625 | Not Available | Negative | 141684 - 143084 | 51235.8 |
| efflux rnd transporter permease subunit | D7004_00630 | Not Available | Negative | 143097 - 146276 | 114813.0 |
| efflux rnd transporter periplasmic adaptor subunit | D7004_00635 | Not Available | Negative | 146322 - 147491 | 41567.0 |
| diaminopimelate epimerase | D7004_00640 | Not Available | Negative | 147965 - 148756 | 29223.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

