Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D7004_00545 | Not Available | Negative | 124505 - 124708 | 7613.44 |
| 23s rrna pseudouridine(2604) synthase rluf | D7004_00550 | Not Available | Negative | 124823 - 125785 | 35894.1 |
| dinb family protein | D7004_00555 | Not Available | Negative | 125969 - 126529 | 21291.5 |
| yafy family transcriptional regulator | D7004_00560 | Not Available | Negative | 126613 - 127302 | 27046.8 |
| response regulator | D7004_00565 | Not Available | Positive | 127528 - 130008 | 93886.1 |
| sigma-54-dependent fis family transcriptional regulator | D7004_00570 | Not Available | Negative | 130066 - 131397 | 49477.5 |
| hypothetical protein | D7004_00575 | Not Available | Negative | 131464 - 131778 | 11133.3 |
| hypothetical protein | D7004_00580 | Not Available | Negative | 131925 - 132239 | 11321.6 |
| yccf domain-containing protein | D7004_00585 | Not Available | Negative | 132495 - 132863 | 13360.1 |
| hypothetical protein | D7004_00590 | Not Available | Positive | 132971 - 133324 | 13465.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

