Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic acid transferase | D7004_05810 | Not Available | Positive | 1427366 - 1428604 | 47257.0 |
| res domain-containing protein | D7004_05815 | Not Available | Negative | 1428594 - 1429043 | 17109.8 |
| duf2384 domain-containing protein | D7004_05820 | Not Available | Negative | 1429043 - 1429513 | 17452.8 |
| ferrochelatase | D7004_05825 | Not Available | Negative | 1429577 - 1430587 | 38185.1 |
| fatty acid desaturase | D7004_05830 | Not Available | Negative | 1430673 - 1431368 | 27701.6 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | D7004_05835 | Not Available | Negative | 1431400 - 1432248 | 32137.1 |
| carotenoid biosynthesis protein | D7004_05840 | Not Available | Negative | 1432276 - 1432935 | 25187.1 |
| glycosyltransferase | D7004_05845 | Not Available | Negative | 1432905 - 1434002 | 41653.1 |
| glycerol acyltransferase | D7004_05850 | Not Available | Negative | 1433999 - 1434622 | 24269.1 |
| phosphoribosyltransferase | D7004_05855 | Not Available | Negative | 1434701 - 1435210 | 19412.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

