Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | D7004_05760 | Not Available | Negative | 1416737 - 1418167 | 53996.3 |
| methylmalonyl-coa mutase | D7004_05765 | Not Available | Negative | 1418619 - 1420166 | 57120.8 |
| hypothetical protein | D7004_05770 | Not Available | Negative | 1420280 - 1420810 | 20077.7 |
| iron-sulfur cluster assembly accessory protein | D7004_05775 | Not Available | Positive | 1420901 - 1421254 | 12783.1 |
| ftsx-like permease family protein | D7004_05780 | Not Available | Positive | 1421367 - 1422599 | 44099.3 |
| capsular biosynthesis protein | D7004_05785 | Not Available | Negative | 1422661 - 1423398 | 27929.7 |
| hypothetical protein | D7004_05790 | Not Available | Negative | 1423417 - 1423971 | 21158.1 |
| udp-glucose 4-epimerase gale | D7004_05795 | Not Available | Negative | 1423972 - 1424994 | 37631.7 |
| sdr family oxidoreductase | D7004_05800 | Not Available | Negative | 1424998 - 1425987 | 37323.8 |
| udp-glucose/gdp-mannose dehydrogenase family protein | D7004_05805 | Not Available | Negative | 1425990 - 1427300 | 48299.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

