Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-gamma-glutamyl-phosphate reductase | D7004_05510 | Not Available | Negative | 1362926 - 1363981 | 37798.0 |
| cupin domain-containing protein | D7004_05515 | Not Available | Negative | 1363959 - 1364309 | 13294.6 |
| argininosuccinate synthase | D7004_05520 | Not Available | Negative | 1364378 - 1365574 | 44379.9 |
| gnat family n-acetyltransferase | D7004_05525 | Not Available | Negative | 1365574 - 1366275 | 26582.5 |
| duf4397 domain-containing protein | D7004_05530 | Not Available | Positive | 1366847 - 1367557 | 25167.8 |
| tonb-dependent receptor | D7004_05535 | Not Available | Positive | 1367778 - 1370165 | 87841.7 |
| pepsy domain-containing protein | D7004_05540 | Not Available | Positive | 1370175 - 1371335 | 44184.9 |
| m28 family peptidase | D7004_05545 | Not Available | Positive | 1371425 - 1372579 | 42575.4 |
| hypothetical protein | D7004_05550 | Not Available | Positive | 1372758 - 1373828 | 41021.1 |
| tonb-dependent receptor | D7004_05555 | Not Available | Positive | 1374157 - 1376673 | 93083.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

