Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility protein remb | D7004_00495 | Not Available | Positive | 114129 - 115739 | 61152.8 |
| 1-deoxy-d-xylulose-5-phosphate synthase | D7004_00500 | Not Available | Negative | 115822 - 117750 | 70250.5 |
| hypothetical protein | D7004_00505 | Not Available | Negative | 117990 - 118175 | 7186.97 |
| hypothetical protein | D7004_00510 | Not Available | Negative | 118293 - 118514 | 8498.55 |
| chromosome segregation protein scpa | D7004_00515 | Not Available | Positive | 118622 - 119365 | 28826.8 |
| serine hydroxymethyltransferase | D7004_00520 | Not Available | Positive | 119429 - 120700 | 45824.4 |
| hypothetical protein | D7004_00525 | Not Available | Negative | 120978 - 122351 | 50438.2 |
| comf family protein | D7004_00530 | Not Available | Negative | 122370 - 123080 | 26426.2 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | D7004_00535 | Not Available | Negative | 123185 - 124246 | 39788.6 |
| txe/yoeb family addiction module toxin | D7004_00540 | Not Available | Negative | 124248 - 124529 | 10782.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

