Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D7004_05410 | Not Available | Negative | 1343796 - 1344140 | 13498.3 |
| duf433 domain-containing protein | D7004_05415 | Not Available | Negative | 1344141 - 1344377 | 8910.77 |
| sprt domain-containing protein | D7004_05420 | Not Available | Negative | 1344418 - 1344996 | 22762.5 |
| gxxexxy protein | D7004_05425 | Not Available | Negative | 1345193 - 1345570 | 14185.7 |
| helicase | D7004_05430 | Not Available | Negative | 1345764 - 1348007 | 85607.2 |
| peptide chain release factor 3 | D7004_05435 | Not Available | Positive | 1348742 - 1350322 | 60026.4 |
| hypothetical protein | D7004_05440 | Not Available | Negative | 1350414 - 1350725 | 12028.7 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D7004_05445 | Not Available | Negative | 1351098 - 1352351 | 45609.6 |
| fic family protein | D7004_05450 | Not Available | Negative | 1352368 - 1353129 | 29459.3 |
| argininosuccinate lyase | D7004_05455 | Not Available | Negative | 1353289 - 1354620 | 49799.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

