Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketoacyl-acp synthase iii | D7004_05310 | Not Available | Negative | 1324377 - 1325423 | 38259.7 |
| atp-dependent clp protease adaptor clps | D7004_05315 | Not Available | Positive | 1325589 - 1325870 | 10966.0 |
| hypothetical protein | D7004_05320 | Not Available | Positive | 1325924 - 1326130 | 7863.63 |
| hypothetical protein | D7004_05325 | Not Available | Positive | 1326120 - 1326446 | 12296.0 |
| thioredoxin family protein | D7004_05330 | Not Available | Negative | 1326447 - 1327046 | 22575.3 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | D7004_05335 | Not Available | Negative | 1327267 - 1328052 | 29950.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | D7004_05340 | Not Available | Positive | 1328212 - 1329291 | 39257.8 |
| sulfurtransferase | D7004_05345 | Not Available | Positive | 1329590 - 1330426 | 30699.5 |
| duf177 domain-containing protein | D7004_05350 | Not Available | Positive | 1330539 - 1331069 | 20377.3 |
| 50s ribosomal protein l32 | D7004_05355 | Not Available | Positive | 1331085 - 1331276 | 7104.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

