Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter jejuensis |
| Strain | TNB23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1545139 bp
Thymine Count
1535008 bp
Guanine Count
847953 bp
Cytosine Count
868280 bp
Genome Length
4799680 bp
Protein-coding Genes
3970 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | D7004_05155 | Not Available | Negative | 1287012 - 1288682 | 62506.8 |
| blai/meci/copy family transcriptional regulator | D7004_05160 | Not Available | Negative | 1288685 - 1289044 | 14098.0 |
| duf1345 domain-containing protein | D7004_05165 | Not Available | Negative | 1290717 - 1291373 | 24317.2 |
| class i sam-dependent methyltransferase | D7004_05170 | Not Available | Negative | 1291370 - 1292158 | 30110.3 |
| hypothetical protein | D7004_05175 | Not Available | Positive | 1292202 - 1293074 | 33698.1 |
| glycoside hydrolase family 18 protein | D7004_05180 | Not Available | Positive | 1293177 - 1294283 | 41193.3 |
| hypothetical protein | D7004_05185 | Not Available | Negative | 1294381 - 1295217 | 30617.3 |
| hypothetical protein | D7004_05195 | Not Available | Negative | 1296398 - 1296586 | 7241.95 |
| peptide chain release factor 2 | D7004_05200 | Not Available | Negative | 1296650 - 1297724 | 41056.3 |
| amidohydrolase | D7004_05205 | Not Available | Negative | 1297832 - 1299136 | 46560.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

