Streptomyces rimosus subsp. rimosus ATCC 10970

Gram-positive

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces rimosus subsp. rimosus ATCC 10970 is a gram-positive bacterium primarily found in soil habitats. This subspecies is notable for its flagella presence, which contributes to its motility in the soil environment. Genetically, S. rimosus subsp. rimosus ATCC 10970 possesses two replicons, indicating a complex genome that may support diverse metabolic pathways. The strain is cataloged under two accessions, NZ_CP048261.1 and NZ_CP048262.1, which may provide insights into its genetic characteristics and potential applications. The ecological role of Streptomyces species, including S. rimosus subsp. rimosus, is significant in soil ecosystems. These bacteria are known for their ability to produce a wide array of bioactive compounds, including antibiotics. The presence of S. rimosus subsp. rimosus in soil contributes to microbial diversity and may play a crucial role in soil health and nutrient cycling. Their flagellar motility may enhance their ability to interact with other soil microorganisms and organic matter, further facilitating ecological processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces rimosus
Strainsubsp. rimosus ATCC 10970

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces rimosus subsp. rimosus ATCC 10970
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces rimosus subsp. rimosus ATCC 10970 chromosome,

Gene Summary

Adenine Count

1306322 bp

Thymine Count

1315509 bp

Guanine Count

3363489 bp

Cytosine Count

3365947 bp

Genome Length

9351267 bp

Protein-coding Genes

8045 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dead/deah box helicaseSRIM_RS09865Not AvailableNegative2239330 - 224200895885.2
wd40 repeat domain-containing proteinSRIM_RS09870Not AvailablePositive2242774 - 224408948395.2
duf6343 family proteinSRIM_RS42445Not AvailablePositive2244540 - 224488111460.6
tetratricopeptide repeat proteinSRIM_RS09880Not AvailableNegative2245270 - 224565314286.9
cupin domain-containing proteinSRIM_RS09885Not AvailableNegative2245904 - 224631714702.3
dephospho-coa kinaseSRIM_RS09890Not AvailableNegative2246447 - 224704621192.6
proteasome assembly chaperone family proteinSRIM_RS09895Not AvailableNegative2247159 - 224810634251.4
wd40 repeat domain-containing proteinSRIM_RS42450Not AvailableNegative2248529 - 22487397357.42
right-handed parallel beta-helix repeat-containing proteinSRIM_RS09905Not AvailablePositive2248892 - 224988433845.6
30s ribosomal protein s1SRIM_RS09910Not AvailableNegative2250033 - 225154455159.6

Displaying genes 2111 – 2120 of 8497 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.