Streptomyces rimosus subsp. rimosus ATCC 10970

Gram-positive

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces rimosus subsp. rimosus ATCC 10970 is a gram-positive bacterium primarily found in soil habitats. This subspecies is notable for its flagella presence, which contributes to its motility in the soil environment. Genetically, S. rimosus subsp. rimosus ATCC 10970 possesses two replicons, indicating a complex genome that may support diverse metabolic pathways. The strain is cataloged under two accessions, NZ_CP048261.1 and NZ_CP048262.1, which may provide insights into its genetic characteristics and potential applications. The ecological role of Streptomyces species, including S. rimosus subsp. rimosus, is significant in soil ecosystems. These bacteria are known for their ability to produce a wide array of bioactive compounds, including antibiotics. The presence of S. rimosus subsp. rimosus in soil contributes to microbial diversity and may play a crucial role in soil health and nutrient cycling. Their flagellar motility may enhance their ability to interact with other soil microorganisms and organic matter, further facilitating ecological processes.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Kitasatosporales
Family	Streptomycetaceae
Genus	Streptomyces
Species	Streptomyces rimosus
Strain	subsp. rimosus ATCC 10970

Profile

Physiology
Gram staining properties	Positive
Shape	Not Available
Mobility	Not Available
Flagellar presence	Yes
Number of membranes	Not Available

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Streptomyces rimosus subsp. rimosus ATCC 10970 chromosome,

NZ_CP048261.1 NZ_CP048262.1

Gene Summary

Adenine Count

1306322 bp

Thymine Count

1315509 bp

Guanine Count

3363489 bp

Cytosine Count

3365947 bp

Genome Length

9351267 bp

Protein-coding Genes

8045 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
lytic polysaccharide monooxygenase	SRIM_RS08475	Not Available	Positive	1930814 - 1931824	34427.2
pyridoxamine 5'-phosphate oxidase family protein	SRIM_RS08480	Not Available	Positive	1932265 - 1932933	24809.4
dna polymerase thumb domain-containing protein	SRIM_RS08485	Not Available	Negative	1932897 - 1933955	37205.5
dna polymerase iii subunit alpha	SRIM_RS08490	Not Available	Negative	1933961 - 1937725	133735.0
abc transporter permease	SRIM_RS08495	Not Available	Positive	1937945 - 1939024	36998.0
sdr family nad(p)-dependent oxidoreductase	SRIM_RS08500	Not Available	Negative	1939049 - 1939813	25758.9
tetr family transcriptional regulator	SRIM_RS08505	Not Available	Positive	1939942 - 1940625	24364.0
molecular chaperone htpg	SRIM_RS08510	Not Available	Negative	1940689 - 1942623	73384.7
duf2254 family protein	SRIM_RS08515	Not Available	Negative	1942720 - 1944045	47977.6
subtilase-type protease inhibitor	SRIM_RS08520	Not Available	Positive	1944485 - 1944910	14535.3

Displaying genes 1831 – 1840 of 8497 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0003389	NADP(+)C21H25N7O17P3		Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0039655	Achromobacter xylosoxidans A8	Not available	Not available	Not available

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.