Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ll-diaminopimelate aminotransferase 2 | BN612_01959 | Not Available | Positive | 1103128 - 1104384 | 46651.4 |
| putative uncharacterized protein | BN612_00170 | Not Available | Negative | 1106989 - 1107972 | 37429.9 |
| putative uncharacterized protein | BN612_00171 | Not Available | Negative | 1107996 - 1108814 | 31069.0 |
| ribosomal rna small subunit methyltransferase h | BN612_00172 | Not Available | Positive | 1109108 - 1110022 | 34940.7 |
| putative uncharacterized protein | BN612_00173 | Not Available | Positive | 1110035 - 1110382 | 13391.2 |
| putative uncharacterized protein | BN612_00174 | Not Available | Positive | 1110385 - 1112514 | 78879.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2 6-diaminopimelate ligase | BN612_00175 | Not Available | Positive | 1112522 - 1113988 | 53346.9 |
| phospho-n-acetylmuramoyl-pentapeptide- transferas e | BN612_00176 | Not Available | Positive | 1114000 - 1115268 | 47244.9 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | BN612_00177 | Not Available | Positive | 1115273 - 1116607 | 50037.8 |
| putative uncharacterized protein | BN612_00178 | Not Available | Positive | 1116618 - 1117949 | 48956.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


