Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had hydrolase family ia variant 1 | BN612_01222 | Not Available | Positive | 107636 - 108280 | 23940.8 |
| 50s ribosomal protein l21 | BN612_01223 | Not Available | Positive | 108438 - 108755 | 11754.3 |
| 50s ribosomal protein l27 | BN612_01224 | Not Available | Positive | 108777 - 109037 | 9029.85 |
| aminodeoxychorismate lyase | BN612_01225 | Not Available | Positive | 109128 - 110159 | 39318.0 |
| pyridoxal-phosphate dependent trpb-like enzyme | BN612_01226 | Not Available | Positive | 110321 - 111685 | 50458.3 |
| unknown | BN612_01227 | Not Available | Positive | 111781 - 111876 | 3488.25 |
| Trna-glu | Not Available | Not Available | Positive | 111855 - 111929 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 111966 - 112040 | Not Available |
| amidophosphoribosyltransferase | BN612_01228 | Not Available | Positive | 112195 - 113601 | 52223.0 |
| atp-dependent chaperone protein clpb | BN612_01229 | Not Available | Negative | 113736 - 116324 | 97489.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


