Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| unknown | BN612_01833 | Not Available | Negative | 947064 - 947240 | 6765.6 |
| nicotinate phosphoribosyltransferase | BN612_01834 | Not Available | Negative | 947770 - 948945 | 45655.5 |
| 50s ribosomal protein l9 | BN612_01835 | Not Available | Negative | 949190 - 949639 | 16323.1 |
| 30s ribosomal protein s18 | BN612_01836 | Not Available | Negative | 949659 - 949928 | 10561.2 |
| 30s ribosomal protein s6 | BN612_01837 | Not Available | Negative | 949931 - 950278 | 13544.4 |
| transcriptional regulator marr family | BN612_01838 | Not Available | Positive | 950663 - 951109 | 17344.2 |
| putative uncharacterized protein | BN612_01839 | Not Available | Positive | 951241 - 951417 | 6083.96 |
| transcriptional regulatory protein rpry | BN612_01840 | Not Available | Negative | 951495 - 952025 | 20371.7 |
| putative uncharacterized protein | BN612_01841 | Not Available | Negative | 952054 - 952200 | 5496.63 |
| integral membrane sensor signal transduction histidine kinase | BN612_01842 | Not Available | Negative | 952202 - 953758 | 59806.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


