Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (r)-citramalate synthase | BN612_01829 | Not Available | Negative | 912845 - 914371 | 56616.9 |
| 3-isopropylmalate dehydratase small subunit | BN612_01830 | Not Available | Negative | 914421 - 915023 | 22694.9 |
| putative uncharacterized protein | BN612_00144 | Not Available | Negative | 915677 - 915859 | 7135.3 |
| restriction modification system dna specificity domain protein | BN612_00145 | Not Available | Negative | 916060 - 917346 | 48651.9 |
| type i restriction-modification system m subunit | BN612_00146 | Not Available | Negative | 917362 - 917688 | 12413.6 |
| putative type i restriction-modification system m subunit | BN612_00147 | Not Available | Negative | 917673 - 918866 | 44610.1 |
| unknown | BN612_00148 | Not Available | Positive | 919998 - 920096 | 3532.33 |
| aspartate carbamoyltransferase | BN612_00149 | Not Available | Positive | 920347 - 921288 | 36257.7 |
| aspartate carbamoyltransferase regulatory chain | BN612_00150 | Not Available | Positive | 921311 - 921769 | 17366.2 |
| flavin reductase domain protein fmn-binding protein | BN612_00151 | Not Available | Positive | 921774 - 922340 | 21139.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


