Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | BN612_01694 | Not Available | Positive | 729040 - 730071 | 39650.9 |
| predicted protein | BN612_01695 | Not Available | Positive | 730248 - 731489 | 45738.1 |
| putative uncharacterized protein | BN612_01696 | Not Available | Negative | 731550 - 733682 | 80419.4 |
| uncharacterized protein | BN612_01697 | Not Available | Negative | 733720 - 734865 | 42416.9 |
| putative o-succinylbenzoate synthase | BN612_01698 | Not Available | Negative | 734858 - 735979 | 42012.4 |
| naphthoate synthase | BN612_01699 | Not Available | Negative | 736083 - 736907 | 30329.7 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | BN612_01700 | Not Available | Negative | 736921 - 738588 | 61963.5 |
| putative uncharacterized protein | BN612_01701 | Not Available | Negative | 738592 - 739674 | 40245.2 |
| putative uncharacterized protein | BN612_01702 | Not Available | Negative | 739671 - 740090 | 14730.9 |
| f5/8 type c domain protein | BN612_01703 | Not Available | Negative | 740276 - 742165 | 71193.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


