Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secreted protein containing mac 1 domain protein | BN612_01674 | Not Available | Negative | 698344 - 700026 | 62421.4 |
| glutamate--ammonia ligase catalytic domain protein | BN612_01675 | Not Available | Negative | 700267 - 700560 | 11436.8 |
| putative uncharacterized protein | BN612_01676 | Not Available | Negative | 700741 - 701310 | 21868.3 |
| nlpc/p60 family protein | BN612_01677 | Not Available | Negative | 701325 - 701828 | 18439.9 |
| aspartate ammonia-lyase | BN612_01678 | Not Available | Positive | 702146 - 703570 | 51907.8 |
| cation diffusion facilitator family transporter | BN612_01679 | Not Available | Negative | 703626 - 704513 | 32615.8 |
| putative uncharacterized protein | BN612_01680 | Not Available | Negative | 704516 - 704944 | 16328.5 |
| s1 rna binding domain protein | BN612_01681 | Not Available | Negative | 705246 - 706820 | 59780.8 |
| dna-binding protein hu | BN612_01682 | Not Available | Negative | 707114 - 707389 | 10100.3 |
| a/g-specific adenine glycosylase | BN612_01683 | Not Available | Positive | 707554 - 708621 | 41108.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


