Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded-dna-specific exonuclease recj | BN612_01580 | Not Available | Positive | 556211 - 557932 | 65020.8 |
| atp-dependent dna helicase recq family | BN612_01581 | Not Available | Positive | 557935 - 559830 | 72882.7 |
| uncharacterized protein | BN612_01582 | Not Available | Negative | 559827 - 561086 | 49090.7 |
| atpase family associated with various cellular activities (aaa) | BN612_01583 | Not Available | Negative | 561142 - 562761 | 61627.8 |
| putative membrane protein | BN612_01584 | Not Available | Negative | 562758 - 563663 | 34155.3 |
| helix-turn-helix domain protein | BN612_01585 | Not Available | Positive | 563815 - 564393 | 21505.5 |
| amp-binding domain protein | BN612_01586 | Not Available | Positive | 564405 - 566057 | 62505.8 |
| sel1 repeat protein | BN612_01587 | Not Available | Negative | 566465 - 567568 | 41924.3 |
| citrate synthase | BN612_01588 | Not Available | Negative | 567631 - 568971 | 50861.5 |
| isocitrate dehydrogenase | BN612_01589 | Not Available | Negative | 568984 - 570246 | 46121.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


