Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative uncharacterized protein | BN612_01521 | Not Available | Negative | 492724 - 493989 | 48353.9 |
| transcription-repair coupling factor | BN612_01522 | Not Available | Negative | 494152 - 497514 | 127262.0 |
| tetratricopeptide tpr_1 repeat-containing protein | BN612_01523 | Not Available | Positive | 497592 - 499772 | 85500.3 |
| uncharacterized protein | BN612_01524 | Not Available | Positive | 499959 - 500354 | 14788.9 |
| nadh-quinone oxidoreductase subunit a | BN612_01525 | Not Available | Positive | 500473 - 500823 | 12888.2 |
| nadh-quinone oxidoreductase subunit b | BN612_01526 | Not Available | Positive | 500844 - 501416 | 21582.2 |
| nadh-quinone oxidoreductase subunit d | BN612_01527 | Not Available | Positive | 501471 - 503063 | 60433.2 |
| nadh-quinone oxidoreductase subunit h | BN612_01528 | Not Available | Positive | 503100 - 504191 | 40137.4 |
| 4fe-4s binding domain protein | BN612_01529 | Not Available | Positive | 504225 - 504692 | 17683.3 |
| nadh-ubiquinone/plastoquinone oxidoreductase chain 6 | BN612_01530 | Not Available | Positive | 504705 - 505220 | 18446.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


