Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | BN612_01503 | Not Available | Positive | 467795 - 468604 | 31300.8 |
| lyttr dna-binding domain protein | BN612_01504 | Not Available | Positive | 468597 - 469373 | 30207.4 |
| putative uncharacterized protein | BN612_01505 | Not Available | Negative | 469436 - 470242 | 28519.5 |
| putative uncharacterized protein | BN612_01506 | Not Available | Positive | 470380 - 471573 | 44934.4 |
| antioxidant ahpc/tsa family | BN612_01507 | Not Available | Positive | 471678 - 472127 | 17232.8 |
| protein reca | BN612_01508 | Not Available | Positive | 472155 - 473207 | 37874.3 |
| alpha-l-fucosidase 2 | BN612_01509 | Not Available | Negative | 473265 - 475742 | 93249.3 |
| f5/8 type c domain protein | BN612_01510 | Not Available | Positive | 476195 - 478447 | 84391.4 |
| putative uncharacterized protein | BN612_00103 | Not Available | Negative | 478823 - 479494 | 25495.9 |
| putative uncharacterized protein | BN612_00104 | Not Available | Negative | 479538 - 480710 | 44376.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


