Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | BN612_01423 | Not Available | Positive | 371421 - 371996 | 21878.1 |
| putative uncharacterized protein | BN612_01424 | Not Available | Negative | 372134 - 372967 | 30621.6 |
| putative uncharacterized protein | BN612_01425 | Not Available | Positive | 373073 - 374506 | 54721.2 |
| anaerobic ribonucleoside-triphosphate reductase | BN612_01426 | Not Available | Positive | 374976 - 377408 | 92077.9 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | BN612_01427 | Not Available | Positive | 377422 - 377913 | 18561.0 |
| peptidase s9a/b/c family catalytic domain protein | BN612_01428 | Not Available | Negative | 378541 - 379818 | 48820.4 |
| putative rip metalloprotease rsep | BN612_01429 | Not Available | Negative | 381215 - 382555 | 50884.1 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | BN612_01430 | Not Available | Negative | 382610 - 383782 | 42657.5 |
| peptidase m23 family | BN612_01431 | Not Available | Negative | 383788 - 384645 | 31820.1 |
| ribosome maturation factor rimm | BN612_01432 | Not Available | Negative | 384677 - 385192 | 19742.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


