Phocaeicola coprophilus CAG:333 str. MGS:333

Gram-negativeNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola coprophilus CAG:333 str. MGS:333 is a Gram-negative bacterium recognized for its chemoheterotrophic metabolism. This organism thrives in anaerobic conditions, indicating that it does not require oxygen for growth and survival. It is characterized by the absence of mobility, as it does not possess flagella, despite the presence of flagella genes, which may not contribute to motility in this strain. The temperature range for optimal growth is mesophilic, suggesting that it prefers moderate temperature conditions, typically between 20°C and 45°C. Phocaeicola coprophilus CAG:333 str. MGS:333 has a single replicon, which is indicative of its genomic structure and may reflect its evolutionary adaptations. The accession number for this strain is CBFM000000000.1, which provides a reference for its genomic data and classification in microbial databases. From an ecological perspective, the anaerobic nature and chemoheterotrophic lifestyle of Phocaeicola coprophilus CAG:333 str. MGS:333 suggest it may play a significant role in the decomposition of organic matter, contributing to nutrient cycling within its environment. Its ability to thrive in anaerobic conditions positions it as a potential participant in the gut microbiome of various animals, where it may assist in the breakdown of complex carbohydrates and organic wastes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola coprophilus
StrainCAG:333 MGS:333

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Bacteroides coprophilus CAG:333 WGS project CBFM01000000 data,

Gene Summary

Adenine Count

781377 bp

Thymine Count

766284 bp

Guanine Count

657500 bp

Cytosine Count

679064 bp

Genome Length

2884225 bp

Protein-coding Genes

2352 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux abc transporter permease proteinBN612_01132Not AvailableNegative2854729 - 285707187739.4
uncharacterized proteinBN612_01133Not AvailableNegative2857124 - 285871061473.5
putative uncharacterized proteinBN612_01134Not AvailableNegative2858744 - 285987742814.7
putative bacteriocin export abc transporter lactococcin 972 groupBN612_01135Not AvailableNegative2861109 - 286179825465.7
efflux transporter rnd family mfp subunitBN612_01136Not AvailableNegative2861834 - 286309648348.0
outer membrane efflux proteinBN612_01137Not AvailableNegative2863110 - 286445650597.4
glutathionylspermidine synthaseBN612_01138Not AvailableNegative2864743 - 286587043129.6
uncharacterized proteinBN612_01139Not AvailableNegative2865885 - 286623812780.2
glucose-1-phosphate thymidylyltransferaseBN612_01140Not AvailablePositive2866372 - 286727733573.5
dtdp-4-dehydrorhamnose 3 5-epimeraseBN612_01141Not AvailablePositive2867282 - 286785122015.9

Displaying genes 2381 – 2390 of 2401 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.