Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative uncharacterized protein | BN612_01022 | Not Available | Positive | 2727759 - 2728499 | 29103.0 |
| uncharacterized protein | BN612_01023 | Not Available | Negative | 2728525 - 2729175 | 25067.9 |
| transcriptional regulator luxr family | BN612_01024 | Not Available | Positive | 2729281 - 2730042 | 29352.6 |
| imidazoleglycerol-phosphate dehydratase | BN612_01025 | Not Available | Negative | 2730374 - 2731495 | 42770.1 |
| histidinol-phosphate aminotransferase | BN612_01026 | Not Available | Negative | 2731506 - 2732546 | 39633.6 |
| histidinol dehydrogenase | BN612_01027 | Not Available | Negative | 2732550 - 2733833 | 46805.0 |
| atp phosphoribosyltransferase | BN612_01028 | Not Available | Negative | 2733857 - 2734708 | 31215.1 |
| putative uncharacterized protein | BN612_01029 | Not Available | Negative | 2734920 - 2735225 | 11542.9 |
| uridine kinase | BN612_01030 | Not Available | Positive | 2735298 - 2735909 | 23265.6 |
| lytic transglycosylase catalytic | BN612_01031 | Not Available | Positive | 2735906 - 2737285 | 51359.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


