Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase group 2 family protein | BN612_00994 | Not Available | Negative | 2688473 - 2689639 | 44459.8 |
| diaminopimelate decarboxylase | BN612_00995 | Not Available | Negative | 2689793 - 2690953 | 42754.3 |
| aspartokinase | BN612_00996 | Not Available | Negative | 2691087 - 2692406 | 49197.1 |
| abc transporter atp-binding protein | BN612_00997 | Not Available | Negative | 2692532 - 2693212 | 25864.3 |
| phosphoribosyl-atp diphosphatase | BN612_00998 | Not Available | Negative | 2693217 - 2693831 | 23450.8 |
| imidazole glycerol phosphate synthase subunit hisf | BN612_00999 | Not Available | Negative | 2693861 - 2694616 | 27131.3 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | BN612_01000 | Not Available | Negative | 2694638 - 2695357 | 26437.8 |
| imidazole glycerol phosphate synthase subunit hish | BN612_01001 | Not Available | Negative | 2695408 - 2695998 | 22095.6 |
| Trna-asp | Not Available | Not Available | Positive | 2696251 - 2696324 | Not Available |
| putative uncharacterized protein | BN612_01002 | Not Available | Positive | 2696594 - 2698582 | 70017.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


