Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| unknown | BN612_00924 | Not Available | Positive | 2590882 - 2590998 | 4658.93 |
| unknown | BN612_00925 | Not Available | Positive | 2591027 - 2591140 | 4228.34 |
| alpha amylase catalytic domain protein | BN612_00926 | Not Available | Negative | 2591314 - 2593011 | 64489.1 |
| phospholipase patatin family | BN612_00927 | Not Available | Negative | 2593008 - 2593493 | 17929.8 |
| unknown | BN612_00928 | Not Available | Negative | 2594847 - 2595014 | 6435.93 |
| putative uncharacterized protein | BN612_00929 | Not Available | Positive | 2595041 - 2597074 | 76654.4 |
| arac family transcriptional regulator | BN612_00930 | Not Available | Negative | 2597071 - 2598006 | 36909.6 |
| putative mannose-6-phosphate isomerase class i | BN612_00931 | Not Available | Positive | 2598093 - 2599832 | 66368.2 |
| glucokinase | BN612_00932 | Not Available | Positive | 2599846 - 2600946 | 39346.2 |
| putative alpha-1 2-mannosidase | BN612_00933 | Not Available | Positive | 2600962 - 2603298 | 86932.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


