Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative uncharacterized protein | BN612_00848 | Not Available | Positive | 2490722 - 2494558 | 141943.0 |
| uncharacterized protein | BN612_00849 | Not Available | Positive | 2494971 - 2497571 | 97355.7 |
| uncharacterized protein | BN612_00850 | Not Available | Negative | 2497660 - 2499942 | 86358.6 |
| alpha-1 2-mannosidase | BN612_00851 | Not Available | Negative | 2499939 - 2502260 | 87072.9 |
| unknown | BN612_00852 | Not Available | Negative | 2502448 - 2502702 | 9454.66 |
| acyl carrier protein 1 | BN612_00853 | Not Available | Positive | 2502738 - 2502974 | 8434.87 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | BN612_00854 | Not Available | Positive | 2502991 - 2504256 | 44800.9 |
| ribonuclease 3 | BN612_00855 | Not Available | Positive | 2504260 - 2505186 | 35414.2 |
| 6-phosphofructokinase 1 | BN612_00856 | Not Available | Negative | 2505288 - 2506298 | 35876.5 |
| gh3 auxin-responsive promoter | BN612_00857 | Not Available | Positive | 2506441 - 2507946 | 57190.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


