Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative uncharacterized protein | BN612_00687 | Not Available | Positive | 2249436 - 2250533 | 43060.7 |
| predicted protein | BN612_00688 | Not Available | Positive | 2250530 - 2250724 | 7236.37 |
| unknown | BN612_00689 | Not Available | Negative | 2251180 - 2251539 | 13877.7 |
| unknown | BN612_00690 | Not Available | Negative | 2253759 - 2253896 | 5046.74 |
| Trna-pro | Not Available | Not Available | Positive | 2254071 - 2254148 | Not Available |
| had hydrolase family ia | BN612_00691 | Not Available | Negative | 2254303 - 2254938 | 24148.8 |
| pseudouridine synthase rlua family | BN612_00692 | Not Available | Negative | 2254949 - 2255872 | 35712.2 |
| 23s rrna (uracil-5-)-methyltransferase ruma | BN612_00693 | Not Available | Negative | 2255899 - 2257386 | 56659.4 |
| pyruvate phosphate dikinase | BN612_00694 | Not Available | Positive | 2257555 - 2260278 | 99864.4 |
| unknown | BN612_00695 | Not Available | Positive | 2260431 - 2260631 | 7856.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


