Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1 2-mannosidase family protein | BN612_00560 | Not Available | Positive | 2069028 - 2071388 | 89514.3 |
| excisionase family dna binding domain-containing protein | BN612_00561 | Not Available | Negative | 2071967 - 2072278 | 12164.0 |
| n-acetylglucosamine-6-phosphate deacetylase | BN612_00562 | Not Available | Negative | 2073232 - 2074401 | 42136.5 |
| n-acetylglucosamine-6-phosphate deacetylase | BN612_00563 | Not Available | Negative | 2074422 - 2075588 | 42562.5 |
| uncharacterized protein | BN612_00564 | Not Available | Positive | 2075904 - 2076428 | 19924.4 |
| 50s ribosomal protein l32 | BN612_00565 | Not Available | Positive | 2076445 - 2076630 | 6852.33 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 | BN612_00566 | Not Available | Positive | 2076746 - 2077747 | 36744.1 |
| gtpase era | BN612_00567 | Not Available | Positive | 2077828 - 2078709 | 33736.0 |
| gtpase der | BN612_00568 | Not Available | Positive | 2078750 - 2080063 | 49332.4 |
| abc transporter atp-binding protein | BN612_00569 | Not Available | Negative | 2080420 - 2081187 | 28927.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


