Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative uncharacterized protein | BN612_00430 | Not Available | Negative | 1910451 - 1911095 | 24491.6 |
| putative uncharacterized protein | BN612_00431 | Not Available | Negative | 1911387 - 1912301 | 35653.1 |
| outer membrane efflux protein | BN612_00432 | Not Available | Positive | 1912654 - 1913871 | 46605.1 |
| auxiliary transport protein membrane fusion protein (mfp) family protein | BN612_00433 | Not Available | Positive | 1913906 - 1914766 | 32321.6 |
| uncharacterized protein | BN612_00434 | Not Available | Positive | 1914781 - 1916385 | 61737.5 |
| putative uncharacterized protein | BN612_00435 | Not Available | Negative | 1916664 - 1917599 | 35736.1 |
| putative uncharacterized protein | BN612_00436 | Not Available | Negative | 1917778 - 1920264 | 92639.9 |
| putative uncharacterized protein | BN612_00437 | Not Available | Positive | 1920368 - 1921063 | 25337.3 |
| s-ribosylhomocysteine lyase | BN612_00438 | Not Available | Positive | 1921100 - 1921588 | 18295.0 |
| conserved domain protein | BN612_00439 | Not Available | Positive | 1921814 - 1924723 | 110848.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


