Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux abc transporter permease protein | BN612_00400 | Not Available | Negative | 1870219 - 1871526 | 48640.4 |
| uncharacterized protein | BN612_00401 | Not Available | Negative | 1871675 - 1872931 | 46850.3 |
| putative outer membrane protein oprm | BN612_00402 | Not Available | Positive | 1873390 - 1874892 | 57635.5 |
| uncharacterized protein | BN612_00403 | Not Available | Negative | 1874910 - 1876622 | 63066.2 |
| uncharacterized protein | BN612_00404 | Not Available | Negative | 1876644 - 1877387 | 26674.5 |
| sigma factor regulatory protein fecr/pupr family | BN612_00405 | Not Available | Negative | 1877487 - 1878512 | 38553.0 |
| rna polymerase sigma-70 factor expansion family 1 | BN612_00406 | Not Available | Negative | 1878538 - 1879068 | 21024.0 |
| uncharacterized protein | BN612_00407 | Not Available | Positive | 1879333 - 1880700 | 51001.7 |
| two-component system sensor histidine kinase | BN612_00408 | Not Available | Positive | 1880719 - 1882044 | 50287.2 |
| putative uncharacterized protein | BN612_00409 | Not Available | Positive | 1882208 - 1882756 | 20301.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


