Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprophilus |
| Strain | CAG:333 MGS:333 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
781377 bp
Thymine Count
766284 bp
Guanine Count
657500 bp
Cytosine Count
679064 bp
Genome Length
2884225 bp
Protein-coding Genes
2352 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase family protein | BN612_00005 | Not Available | Positive | 1855273 - 1856046 | 28663.8 |
| putative uncharacterized protein | BN612_00006 | Not Available | Positive | 1856078 - 1857511 | 53894.6 |
| tonb-dependent receptor plug | BN612_00007 | Not Available | Positive | 1857567 - 1860830 | 121303.0 |
| ragb/susd domain-containing protein | BN612_00008 | Not Available | Positive | 1860855 - 1862651 | 67650.9 |
| uncharacterized protein | BN612_00009 | Not Available | Positive | 1862829 - 1864988 | 80539.8 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | BN612_00010 | Not Available | Negative | 1864991 - 1866061 | 40005.8 |
| ammonium transporter | BN612_00011 | Not Available | Negative | 1866148 - 1867479 | 47904.1 |
| magnesium chelatase subunit chli | BN612_00397 | Not Available | Positive | 1867607 - 1868203 | 22191.9 |
| uncharacterized protein | BN612_00398 | Not Available | Negative | 1868208 - 1868882 | 24891.2 |
| putative uncharacterized protein | BN612_00399 | Not Available | Negative | 1868917 - 1870206 | 49390.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


